Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015930022.1_cds_XP_016477184.1_68950
CDS Infomation

[gene=LOC107798678] [db_xref=GeneID:107798678] [protein=endochitinase A-like isoform X3] [protein_id=XP_016477184.1] [location=join(191683..191800,192052..192154,196747..196924,197439..198380,198529..198795)] [gbkey=CDS]
Sequence

ATGGTGATGAGGGAAGTAGATGAAGACCTTGCAATGTTTCTTGAGATGCGCCGTAGCGAA
AAGGAGATGAATGATCAAATTCCTACACACAACTCTGAGGAATTGGATCAGCAATTAGGC
TCAGAGGTTGACTTCTCTTTGTTATCAAATGGGGCATCAACAGAGCCTGCTAATCAAGAT
TATCTTCTAAACTCTGAGAATGACAAGAATGACTATGACTGGCTCCTTTCACTGCCTCAT
ACCCCTTCAAATCTATCGCTAGAGGTGGAAGAACAGAATATTGCAGTACTCCAGAATGCG
ATAGATTCTAATTCAACTGCTCAAGACTGTAAAATTGAGACAGATTCAAGTACAACTGCT
CCAGAATCTAAAATAAGATTCGAGCAGGATTTAGCTCAGCCTGAGAATTCCCTCGAAGGA
CCCTCTTCGCAGAGTAATTCAACTGGATTGCCGGCCGTGTCCAGAAGCAAAAACTCTTGT
CCTGGAAATGGAAGGCCTTCATCATCAGGGGGTAAAAAGGCAACGTCCACAAGGTCAGCT
ACGCCTACTGGACGTCCTCGTATTTCTGCATCCAAGCCCTCAAGAGCTTCCACTCCTACT
TCAAGAGCAACATTGCCTTCTGTTAAGCCTGTTGCTTCCACAGCAAGATCCTCGACTCCA
ACAAGAGCTGCTCCACGCTCTTCTACCCCAACCAGTAGACCCTCCAAACCAGCTGCCTCC
AAGTCAGCATCAAGGTCAGCAACGCCAACTCGTCGACCATCAACTCCATCATCCATTCCT
ATTGTATCGGTTTCTGGGGCTCGATCTTCTTTGCTGACAAAAGCGGGAACCACAATCTCC
AAAAAAACTGCACCATTACGAGGTACCTCTCCAACTGTGAAGTCTAGGCCATTGAAACCC
TTGGAGACGCCAAGTCTGTCGCGTGATTCTTCTATCAATTCTAAGACATTGGTGCCTAAA
AGGCCTGCATCTGCATCTAGGGGAAGACCGACTGCACCTGCTGCTCGACCCTCTACCACT
AATTCAAGTTCTGATGGAAAACCCAGGCGGAAATCATGTTCTCCTTCTAGAGGACGAGCA
ACAAATGCTACTATTTTGAGCAATGCAACCACTCTACTGTCCAAGAGTAGGGGACATGGT
TATGAGAAAGATGATGTGAACCCTGTGTTGATCGGCACACAGATGGTTGAAAGGGTAGTA
AACATGAGGAAGTTAGCTCCCCCCAAGCAAGATGATAATCCATATCAGGAAAACCCCTCC
AAGAAATCTTTGTCCCGGGAAAATTCAGGCTTCGGAAGATCATTTTCCAAAAAATCTTTG
GATATGGCTCTACGGCACATGGATATAAGACGAAGTGTTAATGGAACCTTACGCCCAGTT
CTGACAAGGGTCTCATCTTCTTCAGCAAATGGTATCCGGTCTAGCTCCACAAAGAACAAG
ACAGGTAGCGTTTCTGACTCGCCACTTGCCACGAGCAGCACTACTAGTTCCGAGCCTAGT
ATCAACAATAGCTCTAATAATGTAAATTGGAGTGAACCGGAGGATGATAACTTTGGTTGT
GAGAGGGAACTATCCTCCCCTACGAGCCAGCAGCATCTGGAGCAGTAA

Peptide Sequence

PEP ID

XP_016477184.1
PEP Infomation

PREDICTED: endochitinase A-like isoform X3 [Nicotiana tabacum]
Sequence

MVMREVDEDLAMFLEMRRSEKEMNDQIPTHNSEELDQQLGSEVDFSLLSNGASTEPANQD
YLLNSENDKNDYDWLLSLPHTPSNLSLEVEEQNIAVLQNAIDSNSTAQDCKIETDSSTTA
PESKIRFEQDLAQPENSLEGPSSQSNSTGLPAVSRSKNSCPGNGRPSSSGGKKATSTRSA
TPTGRPRISASKPSRASTPTSRATLPSVKPVASTARSSTPTRAAPRSSTPTSRPSKPAAS
KSASRSATPTRRPSTPSSIPIVSVSGARSSLLTKAGTTISKKTAPLRGTSPTVKSRPLKP
LETPSLSRDSSINSKTLVPKRPASASRGRPTAPAARPSTTNSSSDGKPRRKSCSPSRGRA
TNATILSNATTLLSKSRGHGYEKDDVNPVLIGTQMVERVVNMRKLAPPKQDDNPYQENPS
KKSLSRENSGFGRSFSKKSLDMALRHMDIRRSVNGTLRPVLTRVSSSSANGIRSSSTKNK
TGSVSDSPLATSSTTSSEPSINNSSNNVNWSEPEDDNFGCERELSSPTSQQHLEQ

Transcript Sequence

Gene sequence data has not been registered.